Visualizing the next generation of sequencing data with GenomeView .. .. A .. Why inverse proteins are relatively abundant, J.-C. Nebel and C. Walawage, Protein & Peptide Letters, 17(7), Michal Nánási ([email protected] ) Website: (free download, tutorials, manual, . Next generation sequencing presents new challenges in large scale data at the European Conference of Computational Biology (ECCB) , Ghent. Tutorials, workshops and seminars To do bioinformatics well, you need to learn 3 things. ECCB Next-gen sequencing Tutorial (Thomas [email protected]).

Author: Shaktijinn Vudozragore
Country: Cyprus
Language: English (Spanish)
Genre: Art
Published (Last): 8 April 2012
Pages: 115
PDF File Size: 18.90 Mb
ePub File Size: 12.97 Mb
ISBN: 368-7-30000-375-2
Downloads: 34761
Price: Free* [*Free Regsitration Required]
Uploader: Yozshur

Flexible and interactive visualization of GFA sequence graphs. The origins of problems are discussed as well as their importance for follow up studies.

Submission authors were asked to rank the five themes for fit of their paper. Going back in time, the swquencing previous editions of ECCB have been held in: The type and volume of the data sequenciny by next-generation sequencing machines presents many previously unseen informatics challenges. Citing articles via Web of Science 1. Each of you will bring something to the conference in terms of scientific contributions, applications, oral or poster presentations and discussions. Receive exclusive offers and updates from Oxford Academic.

Next generation sequencing

Finally, the ELIXIR track proved to be a very popular addition, with 50 high-quality submissions for only 12 presentation slots. The Applications Track features 11 presentations, which were selected out of 31 submissions.

The conference topics span all areas of methodological developments for computational biology and innovative applications of computational methods to molecular biology and biomedicine. They will be presenting the latest scientific literature in the field of computational biology, bioinformatics, data stewardship, modeling and simulation, as well as new hardware, software and technology developments.


The ECCB conferences are gathering about a thousand scientists and industry staff working at the intersection of a broad range of disciplines including computer science, mathematics, biology and medicine. Essentially, these efforts contribute to the success and reputation of the ECCB conference! We thank all those who provided financial support to the conference. It is therefore important for all protein structure bioinformaticians to be able to evaluate the quality of the structures used in their studies and to know when it might be beneficial to ask an NMR spectroscopist or X-ray crystallographer to help bring an old file up to today’s standards.


The annotation of the non-coding genome with gene regulatory function is lagging far behind the annotation of protein-coding genes and improved annotation will depend both on deeper biological insight into cis-regulatory logic and on more efficient computational prediction algorithms.

We also thank, as our further supporting sponsors, Gemeentemuseum Wccb Haag, where also the opening reception will be held, the Municipality of The Hague, Bayer sponsoring the morning run and The Utrecht Bioinformatics Centre sponsoring the Poster Award. Friday, 01 April As data integration is a pre-requisite for systems biology and translational research, the Semantic Web can bring relevant benefits in these areas.

In this short course, we will introduce the participants to the different next-generation sequencing technologies, show how to do some basic quality checking of the data, how to run the various next-generation alignment tools, create de novo sequence assemblies, and call variants such as SNPs, short indels, and structural variants from a reference sequence.

New challenges are now emerging in these fields with the recent advances in low-cost ultra-fast sequencing, bio-imaging and big data. Current methods and applications for regulatory sequence analysis Tutorial 4: Linking sequence patterns and functionality of alpha-helical antimicrobial peptides.

On the scientific side, the Proceedings Track presents novel scientific contributions, while the Highlights Track showcases already published high-impact science in computational biology.

Related articles in Web of Science Google Scholar. The 48 accepted papers are included in this special issue. All poster abstracts are available on the conference web next-gn.

In recent years, there has been a revolution in the area of DNA sequencing with the arrival of next-generation sequencing technologies.


Ruben Kok Dutch Techcentre for Life Sciences had a decisive role in the Local Steering Committee, while Celia van Gelder is thanked once more for her support also in sequencinh matters.

Learning resources | BacPathGenomics

All original research papers that had been published in peer-review neext-gen between 1 March,and the submission deadline of 29 March next-gem, were eligible to be presented as a Highlight talk. Taken together, the workshops demonstrate how extensively technologies have found their way into large-scale practical applications: Oxford University Press is a department of the University of Oxford. Gkoutos University of Birmingham, UK. We also arranged with FResearch http: Consequently, submissions relating to nwxt-gen research were deemed out of scope.

Computational analysis platforms are challenged by the enormous complexity of biological systems and the sheer amount of data resulting from high-throughput measuring techniques, such as single-cell or single-molecule measurements.

The ECCB science has been in the able hands of the following individuals, whose painstaking sequdncing have been vital: The purpose of the ECCB tutorial program is to provide participants with lectures and hands-on training, covering topics relevant to the field of bioinformatics. Friday, 01 April Sponsored Talks enable sponsors to showcase their innovations in computational biology and to highlight their scientific value.

ECCB The 15th European Conference on Computational Biology | Bioinformatics | Oxford Academic

Discovery of statistically significant post-translational modification motifs. A dedicated Education Poster Track was created to devote in-depth attention to education that is so crucial for the next generation of bioinformaticians.

Inhe co-founded the Vertebrate Resequencing Informatics group and manages the sequencing, informatics, and variation pipelines for large projects such as the genomes http: